quantus.metrics.faithfulness.infidelity module
This module contains the implementation of the Infidelity metric.
- final class quantus.metrics.faithfulness.infidelity.Infidelity(loss_func: str | Callable = 'mse', perturb_patch_sizes: List[int] | None = None, n_perturb_samples: int = 10, abs: bool = False, normalise: bool = False, normalise_func: Callable[[ndarray], ndarray] | None = None, normalise_func_kwargs: Dict[str, Any] | None = None, perturb_func: Callable | None = None, perturb_baseline: str = 'black', perturb_func_kwargs: Dict[str, Any] | None = None, return_aggregate: bool = False, aggregate_func: Callable | None = None, default_plot_func: Callable | None = None, disable_warnings: bool = False, display_progressbar: bool = False, **kwargs)
Bases:
Metric[List[float]]Implementation of Infidelity by Yeh et al., 2019.
Explanation infidelity represents the expected mean square error between 1) a dot product of an attribution and input perturbation and 2) difference in model output after significant perturbation.
- Assumptions:
The original implementation (https://github.com/chihkuanyeh/saliency_evaluation/
blob/master/infid_sen_utils.py) supports perturbation of Gaussian noise and squared patches. In this implementation, we use squared patches as the default option. - Since we use squared patches in this implementation, the metric is only applicable to 3-dimensional (image) data. To extend the applicability to other data domains, adjustments to the current implementation might be necessary.
- References:
1) Chih-Kuan Yeh et al.: “On the (In)fidelity and Sensitivity of Explanations.” 33rd Conference on Neural Information Processing Systems (NeurIPS 2019), Vancouver, Canada.
- Attributes:
_name: The name of the metric.
_data_applicability: The data types that the metric implementation currently supports.
_models: The model types that this metric can work with.
score_direction: How to interpret the scores, whether higher/ lower values are considered better.
evaluation_category: What property/ explanation quality that this metric measures.
- Attributes:
disable_warningsA helper to avoid polluting test outputs with warnings.
display_progressbarA helper to avoid polluting test outputs with tqdm progress bars.
get_paramsList parameters of metric.
Methods
__call__(model, x_batch, y_batch[, a_batch, ...])This implementation represents the main logic of the metric and makes the class object callable.
batch_preprocess(data_batch)If data_batch has no a_batch, will compute explanations.
custom_batch_preprocess(*, model, x_batch, ...)Implement this method if you need custom preprocessing of data or simply for creating/initialising additional attributes or assertions before a data_batch can be evaluated.
custom_postprocess(*, model, x_batch, ...)Implement this method if you need custom postprocessing of results or additional attributes.
custom_preprocess(x_batch, **kwargs)Implementation of custom_preprocess_batch.
evaluate_batch(model, x_batch, y_batch, ...)This method performs XAI evaluation on a single batch of explanations.
explain_batch(model, x_batch, y_batch)Compute explanations, normalise and take absolute (if was configured so during metric initialization.) This method should primarily be used if you need to generate additional explanation in metrics body. It encapsulates typical for Quantus pre- and postprocessing approach. It will do few things: - call model.shape_input (if ModelInterface instance was provided) - unwrap model (if ModelInterface instance was provided) - call explain_func - expand attribution channel - (optionally) normalise a_batch - (optionally) take np.abs of a_batch.
general_preprocess(model, x_batch, y_batch, ...)Prepares all necessary variables for evaluation.
generate_batches(data, batch_size)Creates iterator to iterate over all batched instances in data dictionary.
interpret_scores()Get an interpretation of the scores.
plot([plot_func, show, path_to_save])Basic plotting functionality for Metric class.
- __call__(model, x_batch: ndarray, y_batch: ndarray, a_batch: ndarray | None = None, s_batch: ndarray | None = None, channel_first: bool | None = None, explain_func: Callable | None = None, explain_func_kwargs: Dict | None = None, model_predict_kwargs: Dict | None = None, softmax: bool | None = False, device: str | None = None, batch_size: int = 64, **kwargs) List[float]
This implementation represents the main logic of the metric and makes the class object callable. It completes instance-wise evaluation of explanations (a_batch) with respect to input data (x_batch), output labels (y_batch) and a torch or tensorflow model (model).
Calls general_preprocess() with all relevant arguments, calls () on each instance, and saves results to evaluation_scores. Calls custom_postprocess() afterwards. Finally returns evaluation_scores.
- Parameters:
- model: torch.nn.Module, tf.keras.Model
A torch or tensorflow model that is subject to explanation.
- x_batch: np.ndarray
A np.ndarray which contains the input data that are explained.
- y_batch: np.ndarray
A np.ndarray which contains the output labels that are explained.
- a_batch: np.ndarray, optional
A np.ndarray which contains pre-computed attributions i.e., explanations.
- s_batch: np.ndarray, optional
A np.ndarray which contains segmentation masks that matches the input.
- channel_first: boolean, optional
Indicates of the image dimensions are channel first, or channel last. Inferred from the input shape if None.
- explain_func: callable
Callable generating attributions.
- explain_func_kwargs: dict, optional
Keyword arguments to be passed to explain_func on call.
- model_predict_kwargs: dict, optional
Keyword arguments to be passed to the model’s predict method.
- softmax: boolean
Indicates whether to use softmax probabilities or logits in model prediction. This is used for this __call__ only and won’t be saved as attribute. If None, self.softmax is used.
- device: string
Indicated the device on which a torch.Tensor is or will be allocated: “cpu” or “gpu”.
- kwargs: optional
Keyword arguments.
- Returns:
- evaluation_scores: list
a list of Any with the evaluation scores of the concerned batch.
- Examples:
# Minimal imports. >> import quantus >> from quantus import LeNet >> import torch
# Enable GPU. >> device = torch.device(“cuda:0” if torch.cuda.is_available() else “cpu”)
# Load a pre-trained LeNet classification model (architecture at quantus/helpers/models). >> model = LeNet() >> model.load_state_dict(torch.load(“tutorials/assets/pytests/mnist_model”))
# Load MNIST datasets and make loaders. >> test_set = torchvision.datasets.MNIST(root=’./sample_data’, download=True) >> test_loader = torch.utils.data.DataLoader(test_set, batch_size=24)
# Load a batch of inputs and outputs to use for XAI evaluation. >> x_batch, y_batch = iter(test_loader).next() >> x_batch, y_batch = x_batch.cpu().numpy(), y_batch.cpu().numpy()
# Generate Saliency attributions of the test set batch of the test set. >> a_batch_saliency = Saliency(model).attribute(inputs=x_batch, target=y_batch, abs=True).sum(axis=1) >> a_batch_saliency = a_batch_saliency.cpu().numpy()
# Initialise the metric and evaluate explanations by calling the metric instance. >> metric = Metric(abs=True, normalise=False) >> scores = metric(model=model, x_batch=x_batch, y_batch=y_batch, a_batch=a_batch_saliency)
- __init__(loss_func: str | Callable = 'mse', perturb_patch_sizes: List[int] | None = None, n_perturb_samples: int = 10, abs: bool = False, normalise: bool = False, normalise_func: Callable[[ndarray], ndarray] | None = None, normalise_func_kwargs: Dict[str, Any] | None = None, perturb_func: Callable | None = None, perturb_baseline: str = 'black', perturb_func_kwargs: Dict[str, Any] | None = None, return_aggregate: bool = False, aggregate_func: Callable | None = None, default_plot_func: Callable | None = None, disable_warnings: bool = False, display_progressbar: bool = False, **kwargs)
- Parameters:
- loss_func: string
Loss function, default=”mse”.
- perturb_patch_sizes: list
List of patch sizes to be perturbed. If None, the defaul is used, default=[4].
- features_in_step: integer
The size of the step, default=1.
- n_perturb_samples: integer
The number of samples to be perturbed, default=10.
- abs: boolean
Indicates whether absolute operation is applied on the attribution, default=False.
- normalise: boolean
Indicates whether normalise operation is applied on the attribution, default=False.
- normalise_func: callable
Attribution normalisation function applied in case normalise=False. If normalise_func=None, the default value is used, default=normalise_by_max.
- normalise_func_kwargs: dict
Keyword arguments to be passed to normalise_func on call, default={}.
- perturb_func: callable
Input perturbation function. If None, the default value is used, default=baseline_replacement_by_indices.
- perturb_baseline: string
Indicates the type of baseline: “mean”, “random”, “uniform”, “black” or “white”, default=”black”.
- perturb_func_kwargs: dict
Keyword arguments to be passed to perturb_func, default={}.
- return_aggregate: boolean
Indicates if an aggregated score should be computed over all instances.
- aggregate_func: callable
Callable that aggregates the scores given an evaluation call.
- default_plot_func: callable
Callable that plots the metrics result.
- disable_warnings: boolean
Indicates whether the warnings are printed, default=False.
- display_progressbar: boolean
Indicates whether a tqdm-progress-bar is printed, default=False.
- kwargs: optional
Keyword arguments.
- custom_preprocess(x_batch: ndarray, **kwargs) None
Implementation of custom_preprocess_batch.
- Parameters:
- x_batch: np.ndarray
A np.ndarray which contains the input data that are explained.
- kwargs:
Unused.
- Returns:
- None
- evaluate_batch(model: ModelInterface, x_batch: ndarray, y_batch: ndarray, a_batch: ndarray, **kwargs) List[float]
This method performs XAI evaluation on a single batch of explanations. For more information on the specific logic, we refer the metric’s initialisation docstring.
- Parameters:
- model: ModelInterface
A ModelInterface that is subject to explanation.
- x_batch: np.ndarray
The input to be evaluated on a batch-basis.
- y_batch: np.ndarray
The output to be evaluated on a batch-basis.
- a_batch: np.ndarray
The explanation to be evaluated on a batch-basis.
- kwargs:
Unused.
- Returns:
- scores_batch:
The evaluation results.
- evaluation_category: ClassVar[EvaluationCategory] = 'Faithfulness'
- name: ClassVar[str] = 'Infidelity'
- score_direction: ClassVar[ScoreDirection] = 'lower'